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🥜Oilseed & Pulse Crop Diseases — Pathogens, Symptoms, and Management

Comprehensive guide to major diseases of groundnut, mustard, sunflower, pigeon pea, soybean, and chickpea with pathogens, symptoms, management, and exam-focused tables

From Field to Lab — When Oilseeds and Pulses Fall Sick

India is the world’s largest producer of pulses and a major oilseed grower. Groundnut fields in Gujarat ravaged by Tikka leaf spot can lose 50% of their leaf area. Mustard crops in Rajasthan showing swollen, sterile “stag head” formations are suffering from white rust (Albugo candida). Chickpea plants that wilt and die in patches indicate Fusarium wilt — a soil-borne menace that can persist for years. Understanding these diseases is critical for both farm management and competitive exams.


Groundnut Diseases


1. Tikka Leaf Spot (Early + Late Leaf Spot)

IMPORTANT

Tikka disease involves two pathogens — this is a frequently tested distinction in exams.

TypePathogenSpot Character
Early leaf spotCercospora arachidicolaIrregular spots of larger diameter
Late leaf spotCercosporidium personataRegular spots, not more than 0.6 cm in diameter

Symptoms:

  • Small dark brown spots and premature leaf shedding
  • Both pathogens can co-infect the same plant

Management:

  • Seed treatment with Carbendazim or Thiram @ 2 g/kg
  • Spray Carbendazim 500 g or Mancozeb 2 kg or Chlorothalonil 2 kg/ha; repeat after 15 days if necessary

2. Collar Rot / Seedling Blight / Crown Rot — Aspergillus niger and A. pulverulentum

NOTE

The disease appears in three distinct phases depending on the stage of the crop.

Phase 1 — Pre-emergence rot:

  • Seeds attacked by soil-borne conidia causing rotting of seeds
  • Seeds covered with black masses of spores; internal tissues become soft and watery

Phase 2 — Post-emergence rot:

  • Pathogen attacks emerging seedlings causing circular brown spots on cotyledons
  • Affected portion becomes soft and rotten, resulting in collapse of the seedling

Phase 3 — Crown rot (in adult plants):

  • Large lesions develop on stem below soil and spread upwards along branches
  • Causes drooping of leaves and wilting of plant

Management:

  • Crop rotation
  • Destruction of plant debris
  • Remove and destroy previous season’s infested crop debris
  • Seed treatment with Trichoderma viride / T. harzianum @ 4 g/kg
  • Soil application of Trichoderma viride / T. harzianum at 2.5 kg/ha with organic amendments (castor cake or neem cake or mustard cake @ 500 kg/ha)

3. Bud Necrosis Disease — Groundnut bud necrosis virus (GBNV — Tospo virus)

IMPORTANT

GBNV is transmitted by thrips (Tospo virus group). This is an important vector-disease association for exams.

Symptoms:

  • First symptoms visible 2-6 weeks after infection as ring spots on leaves
  • Newly emerging leaves are small, rounded or pinched inwards and rugose with varying patterns of mottling and minute ring spots
  • Necrotic spots and irregularly shaped lesions develop on leaves and petioles
  • Stem also exhibits necrotic streaks

Management:

  • Control thrips vector with systemic insecticides
  • Remove infected plants early
  • Use resistant varieties

Minor Groundnut Disease

DiseasePathogen
Root rotMacrophomina phaseolina

Rapeseed & Mustard Diseases


1. White Rust / White Blister — Albugo candida

TIP

Albugo candida causes “Stag head” formation — the entire inflorescence is replaced by a swollen sterile structure. This is a classic exam question.

Symptoms:

  • White or yellow pustules with variable sizes and shapes on the lower surface of leaves
  • Infection covers all parts except roots
  • Entire inflorescence replaced by swollen sterile structure called “Stag head”

Management:

  • Seed treatment with Metalaxyl (Apron 35 SD) @ 6 g/kg
  • Spray Mancozeb (0.2%) or Ridomil MZ (0.25%)
  • Use resistant varieties

2. Alternaria Blight — Alternaria brassicae

Symptoms:

  • Concentric black spots on leaves, stem, and pods
  • Spots have characteristic target-board appearance

Management:

  • Spray Mancozeb (0.2%) or Iprodione (0.2%)
  • Use resistant/tolerant varieties
  • Crop rotation

3. Downy Mildew — Peronospora brassicae

Symptoms:

  • Yellow and irregular spots on upper surface with white growth on under surface of leaves
  • Malformed inflorescence

Management:

  • Seed treatment with Metalaxyl
  • Spray Ridomil MZ (0.25%)
  • Ensure proper plant spacing for air circulation

4. Clubroot — Plasmodiophora brassicae

IMPORTANT

Plasmodiophora brassicae is an obligate parasite belonging to Myxomycetes. It causes swelling (clubs) on roots and is favoured by acidic soils.

Symptoms:

  • Roots develop abnormal swellings or “clubs”
  • Plants show wilting, stunting, and yellowing

Management:

  • Liming of acidic soils to raise pH above 7.2
  • Long crop rotation (5-7 years)
  • Use resistant varieties

Sunflower Diseases


1. Root Rot / Charcoal Rot — Rhizoctonia bataticola

Symptoms:

  • Pathogen is seed-borne; causes seedling blight and collar rot in initial stages
  • Infected plants show drooping of leaves and death occurs in patches
  • Bark of lower stem and roots shreds; associated with large number of sclerotia

Management:

  • Seed treatment with Carbendazim or Thiram
  • Crop rotation with non-host crops
  • Deep summer ploughing

2. Alternaria Blight

Symptoms:

  • Dark brown to black spots with concentric rings on leaves
  • Severe defoliation in humid conditions

3. Rust and Downy Mildew

  • Rust and downy mildew also affect sunflower
  • Manage with appropriate fungicide sprays and resistant varieties

Red Gram / Pigeon Pea Diseases


1. Wilt — Fusarium udum

NOTE

Fusarium udum is specific to pigeon pea — do not confuse with F. oxysporum which causes wilt in many other crops.

Symptoms:

  • Plants show wilting, yellowing, and drying of leaves
  • Browning of vascular tissues visible when stem is split open
  • Can occur at any growth stage

Management:

  • Use resistant varieties (e.g., Maruti, Asha-ICPL 87119)
  • Seed treatment with Trichoderma viride @ 4 g/kg
  • Crop rotation with cereals

2. Sterility Mosaic Disease (SMD) — Pigeonpea sterility mosaic virus (PPSMV)

IMPORTANT

Vector: Eriophyid mite (Aceria cajani). This mite-virus association is very frequently asked in exams.

Symptoms:

  • Characterised by bushy and pale green appearance of plants
  • Excessive vegetative growth, stunting, prominent mosaic on leaves, and reduction in leaf size
  • Complete or partial cessation of flowering leads to sterility

Management:

  • Control eriophyid mite vector with wettable sulphur or Dicofol sprays
  • Use resistant varieties
  • Remove and destroy infected plants

Soybean Diseases


1. Yellow Mosaic — Yellow mosaic virus

TIP

Vector: Bemisia tabaci (whitefly). The same vector transmits yellow mosaic in green gram and black gram too.

Symptoms:

  • Conspicuous systemic bright yellow mottling of leaves
  • Infected plants show reduced pod formation

Management:

  • Control whitefly with systemic insecticides (Imidacloprid, Thiamethoxam)
  • Use resistant varieties
  • Early sowing to escape peak whitefly population

2. Charcoal Rot — Rhizoctonia bataticola

Symptoms:

  • Reddish black to brown necrotic lesion at crown portion

Management:

  • Seed treatment with Carbendazim
  • Summer ploughing and crop rotation

3. Rust and Purple Seed Stain

  • Soybean rust is an important foliar disease
  • Purple seed stain affects seed quality and marketability

Green Gram Diseases


1. Yellow Mosaic — Yellow mosaic virus

Symptoms:

  • Bright yellow mottling on leaves, transmitted by whitefly (Bemisia tabaci)
  • Severe yield loss when infection occurs early

Management:

  • Spray systemic insecticides to control whitefly
  • Use resistant varieties (e.g., Pusa Vishal, SML 668)

2. Cercospora Leaf Spot

Symptoms:

  • Circular to irregular brown spots on leaves
  • Premature defoliation in severe cases

Minor Green Gram Diseases

DiseasePathogen
Powdery mildewErysiphe polygoni
AnthracnoseColletotrichum lindemuthianum
Dry root rotRhizoctonia bataticola

Bengal Gram / Chickpea Diseases


1. Wilt — Fusarium oxysporum f.sp. ciceri

IMPORTANT

Chickpea wilt is caused by Fusarium oxysporum f.sp. ciceri — note the forma specialis name, which is specific to chickpea. This is different from pigeon pea wilt (F. udum).

Symptoms:

  • Plants show drooping and yellowing of leaves
  • Browning of vascular tissues
  • Can cause total crop failure in susceptible varieties

Management:

  • Use resistant varieties
  • Seed treatment with Carbendazim + Thiram (1:1) @ 2 g/kg or Trichoderma viride @ 4 g/kg
  • Crop rotation with non-host crops

2. Ascochyta Blight — Ascochyta rabiei

Symptoms:

  • Circular brown lesions on leaves, stems, and pods
  • Concentric rings visible on pods
  • Severe in cool, wet weather

Management:

  • Seed treatment with Thiram or Captan
  • Spray Mancozeb (0.2%) or Chlorothalonil
  • Use resistant varieties

3. Botrytis Grey Mould — Botrytis cinerea

Symptoms:

  • Grey mouldy growth on flowers, pods, and stems
  • Favoured by dense canopy and high humidity

Management:

  • Avoid dense planting
  • Spray Carbendazim (0.1%) or Iprodione
  • Use tolerant varieties

Other Bengal Gram Diseases

DiseasePathogen
RustUromyces ciceris-arietini

Sesame Diseases


1. Phyllody — Phytoplasma (MLO)

IMPORTANT

Vector: Leafhopper (Orosius albicinctus). Phyllody literally means “leaf-like” — floral parts transform into green leaf-like structures.

Symptoms:

  • Affected plants are stunted
  • Entire inflorescence is replaced by a growth consisting of green, short, twisted leaves closely arranged on the stem with very short internodes
  • Floral parts converted into leaf-like structures (phyllody)

Management:

  • Control leafhopper vector with systemic insecticides
  • Remove and destroy infected plants
  • Early sowing to avoid peak leafhopper activity

2. Leaf Spot

Symptoms:

  • Circular to irregular spots on leaves
  • Premature defoliation

Management:

  • Spray Mancozeb (0.2%) or Carbendazim (0.1%)
  • Use clean, disease-free seed

Summary Cheat Sheet

FactAnswer
Tikka Early leaf spot pathogenCercospora arachidicola — irregular, larger spots
Tikka Late leaf spot pathogenCercosporidium personata — regular spots, ≤0.6 cm
Groundnut Collar Rot pathogenAspergillus niger — three phases: pre-emergence, post-emergence, crown rot
Groundnut Bud Necrosis virusGBNV (Tospo virus) — vector: Thrips
White Rust of mustard pathogenAlbugo candida
”Stag head” formationWhite Rust (Albugo candida) — entire inflorescence replaced by sterile swollen structure
Mustard Alternaria Blight pathogenAlternaria brassicae — concentric black spots
Mustard Clubroot pathogenPlasmodiophora brassicae — obligate parasite (Myxomycetes); acidic soils favourable
Sunflower Charcoal Rot / Root RotRhizoctonia bataticola — seedling blight, sclerotia in stem
Pigeon Pea Wilt pathogenFusarium udum — specific to pigeon pea
Pigeon Pea Sterility Mosaic vectorEriophyid mite (Aceria cajani)
Soybean Yellow Mosaic vectorWhitefly (Bemisia tabaci)
Chickpea Wilt pathogenFusarium oxysporum f.sp. ciceri
Chickpea Ascochyta Blight pathogenAscochyta rabiei — concentric rings on pods
Chickpea Grey Mould pathogenBotrytis cinerea — favoured by dense canopy + humidity
Sesame Phyllody causePhytoplasma (MLO) — vector: leafhopper (Orosius albicinctus)
Sesame Phyllody symptomFloral parts converted into green leaf-like structures
Mustard Downy Mildew pathogenPeronospora brassicae
Clubroot managementLime soil to pH > 7.2 + long rotation (5–7 years)
Biocontrol for groundnut Collar RotTrichoderma viride / T. harzianum @ 4 g/kg seed treatment

Quick Revision Table

Complete Oilseed & Pulse Disease Summary
CropDiseasePathogenKey Exam Fact
GroundnutTikka (Early leaf spot)Cercospora arachidicolaIrregular, larger spots
GroundnutTikka (Late leaf spot)Cercosporidium personataRegular spots, less than 0.6 cm
GroundnutCollar rotAspergillus nigerThree phases: pre-emergence, post-emergence, crown rot
GroundnutBud necrosisGBNV (Tospo virus)Vector: Thrips
MustardWhite rustAlbugo candidaStag head formation
MustardAlternaria blightAlternaria brassicaeConcentric black spots
MustardDowny mildewPeronospora brassicaeWhite growth on lower leaf surface
MustardClubrootPlasmodiophora brassicaeRoot swelling, favoured by acidic soil
SunflowerCharcoal rotRhizoctonia bataticolaSeedling blight, sclerotia in stem
Pigeon peaWiltFusarium udumSpecific to pigeon pea
Pigeon peaSterility mosaicPPSMVVector: Eriophyid mite
SoybeanYellow mosaicYMVVector: Whitefly (Bemisia tabaci)
Green gramYellow mosaicYMVVector: Whitefly
ChickpeaWiltF. oxysporum f.sp. ciceriForma specialis specific to chickpea
ChickpeaAscochyta blightAscochyta rabieiConcentric rings on pods
ChickpeaGrey mouldBotrytis cinereaDense canopy + humidity
SesamePhyllodyPhytoplasma (MLO)Vector: Leafhopper (Orosius albicinctus)
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